Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pullulanase-type alpha-1,6-glucosidase | VP_RS22995 | P07206 | + | 1743486 - 1747475 | 144575.0 |
| endonuclease | VP_RS23000 | Q03091 | - | 1747589 - 1749205 | 59056.6 |
| alpha-amylase family glycosyl hydrolase | VP_RS23005 | A0A7U9P668 | - | 1749551 - 1751161 | 58613.2 |
| glycosidase | VP_RS23010 | Not Available | - | 1751282 - 1751788 | 18577.2 |
| malm family protein | VP_RS23015 | Not Available | - | 1752102 - 1752911 | 29101.8 |
| maltoporin | VP_RS23020 | P59494 | - | 1753012 - 1754310 | 46964.9 |
| glycogen debranching protein glgx | VP_RS23025 | P0A4Y5 | + | 1754755 - 1756746 | 75968.7 |
| recombinase family protein | VP_RS23030 | Not Available | + | 1756990 - 1757634 | 23990.6 |
| multidrug effflux mfs transporter | VP_RS23035 | Not Available | + | 1757631 - 1758839 | 43864.2 |
| hypothetical protein | VP_RS23040 | Not Available | - | 1758919 - 1760646 | 62777.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

