Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | VP_RS22445 | Not Available | - | 1627044 - 1628483 | 53345.7 |
| hypothetical protein | VP_RS22450 | Not Available | - | 1628633 - 1628992 | 13231.1 |
| cytochrome b562 | VP_RS22455 | Not Available | - | 1629156 - 1629545 | 14525.3 |
| phosphatase | VP_RS22460 | Q87FZ3 | - | 1629699 - 1630451 | 27849.8 |
| srpbcc domain-containing protein | VP_RS22465 | Not Available | - | 1630591 - 1631043 | 17462.4 |
| dmt family transporter | VP_RS22470 | Not Available | - | 1631144 - 1632070 | 33554.3 |
| lysr substrate-binding domain-containing protein | VP_RS22475 | P12529 | + | 1632183 - 1633073 | 33927.8 |
| trypsin-like serine protease | VP_RS22480 | Q7PEV7 | + | 1633161 - 1634198 | 37268.3 |
| flagellar export protein flij | VP_RS22485 | Not Available | - | 1634236 - 1634676 | 16972.7 |
| flagellar protein export atpase flii | VP_RS22490 | Q9I4N1 | - | 1634692 - 1636041 | 48814.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

