Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | VP_RS22395 | P0AEQ5 | - | 1617722 - 1618654 | 34849.6 |
| aminotransferase class v-fold plp-dependent enzyme | VP_RS22400 | Q03046 | - | 1618718 - 1620124 | 52817.3 |
| superoxide dismutase family protein | VP_RS22405 | P00446 | + | 1620670 - 1621185 | 17473.7 |
| sensor histidine kinase kdpd | VP_RS22410 | B7KFU0 | - | 1621213 - 1622586 | 51346.7 |
| response regulator transcription factor | VP_RS22415 | P13792 | - | 1622611 - 1623342 | 27682.7 |
| spondin domain-containing protein | VP_RS22420 | Not Available | - | 1623531 - 1624226 | 24398.4 |
| spondin domain-containing protein | VP_RS22425 | Not Available | - | 1624236 - 1624919 | 23166.1 |
| hypothetical protein | VP_RS22430 | Not Available | + | 1625140 - 1625613 | 18468.9 |
| lysr family transcriptional regulator | VP_RS22435 | P52689 | + | 1625691 - 1626620 | 34401.7 |
| voc family protein | VP_RS22440 | P52096 | + | 1626613 - 1626996 | 14627.4 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

