Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | VP_RS22245 | P37683 | + | 1580281 - 1581411 | 41620.5 |
| ecf-type riboflavin transporter substrate-binding protein | VP_RS22250 | Q87G36 | + | 1581749 - 1582297 | 19571.6 |
| abc transporter atp-binding protein | VP_RS22255 | Q87G35 | + | 1582304 - 1584043 | 64056.9 |
| energy-coupling factor transporter transmembrane protein ecft | VP_RS22260 | Not Available | + | 1584040 - 1584879 | 31331.3 |
| mfs transporter | VP_RS22265 | Not Available | - | 1584962 - 1586143 | 43904.6 |
| quinol dehydrogenase ferredoxin subunit naph | VP_RS22270 | P33934 | - | 1586346 - 1587200 | 31628.6 |
| ferredoxin-type protein napg | VP_RS22275 | P44652 | - | 1587200 - 1587970 | 27400.0 |
| gnat family n-acetyltransferase | VP_RS22280 | P46854 | + | 1588366 - 1588866 | 18523.1 |
| phosphotransferase | VP_RS22285 | Not Available | - | 1588913 - 1589887 | 37433.7 |
| gnat family n-acetyltransferase | VP_RS22290 | Not Available | - | 1589890 - 1590165 | 10471.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

