Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lpp/opri family alanine-zipper lipoprotein | VP_RS22195 | Not Available | + | 1569402 - 1569656 | 8670.96 |
| l,d-transpeptidase family protein | VP_RS22200 | P75954 | - | 1569683 - 1570609 | 33892.2 |
| deoxyribodipyrimidine photo-lyase | VP_RS22205 | Q9KNA8 | - | 1570616 - 1572031 | 54826.0 |
| merr family transcriptional regulator | VP_RS22210 | P75989 | - | 1572041 - 1572853 | 30373.7 |
| duf523 and duf1722 domain-containing protein | VP_RS22215 | P24252 | - | 1572843 - 1573793 | 36373.7 |
| purine-nucleoside phosphorylase | VP_RS22220 | Q87G42 | + | 1574192 - 1574902 | 25672.1 |
| transposase | VP_RS22225 | Not Available | + | 1574971 - 1576440 | 56074.4 |
| hypothetical protein | VP_RS22230 | Not Available | + | 1576604 - 1578088 | 57266.6 |
| ggdef domain-containing protein | VP_RS22235 | Not Available | + | 1578072 - 1579655 | 59897.9 |
| duf3302 domain-containing protein | VP_RS22240 | P0ADK5 | + | 1579901 - 1580281 | 15180.3 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

