Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-hydroxamate abc transporter permease fhub | VP_RS22045 | O87656 | + | 1515770 - 1517737 | 69671.4 |
| mechanosensitive ion channel family protein | VP_RS22050 | Not Available | - | 1517818 - 1518687 | 33371.4 |
| ompa family protein | VP_RS22055 | Q9I4Z4 | - | 1518749 - 1519654 | 34393.6 |
| hypothetical protein | VP_RS22060 | Not Available | - | 1519664 - 1523179 | 131754.0 |
| duf11 domain-containing protein | VP_RS22065 | Not Available | - | 1523249 - 1534543 | 403730.0 |
| hlyd family type i secretion periplasmic adaptor subunit | VP_RS22070 | P23597 | - | 1535435 - 1536775 | 49797.8 |
| type i secretion system permease/atpase | VP_RS22075 | Q03024 | - | 1536750 - 1538468 | 63041.2 |
| calcium-binding protein | VP_RS22080 | Not Available | - | 1538530 - 1539120 | 19790.4 |
| cyclic-di-gmp-binding transcriptional regulator cpsq | VP_RS22085 | Not Available | - | 1539327 - 1539983 | 25150.3 |
| luxr c-terminal-related transcriptional regulator | VP_RS22090 | P52106 | - | 1540209 - 1540880 | 25407.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

