Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | VP_RS02090 | Q87SI5 | + | 442155 - 442583 | 15961.5 |
| 30s ribosomal protein s9 | VP_RS02095 | Q87SI4 | + | 442599 - 442991 | 14614.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | VP_RS02100 | O31214 | + | 443538 - 444128 | 21440.7 |
| cytochrome bc complex cytochrome b subunit | VP_RS02105 | O31215 | + | 444128 - 445393 | 48352.0 |
| cytochrome c1 | VP_RS02110 | O31216 | + | 445390 - 446127 | 27315.2 |
| stringent starvation protein sspa | VP_RS02115 | P0ACA5 | + | 446224 - 446859 | 24316.5 |
| clpxp protease specificity-enhancing factor | VP_RS02120 | P0AFZ4 | + | 446876 - 447358 | 17912.2 |
| bon domain-containing protein | VP_RS02125 | P45301 | - | 447419 - 448120 | 25321.9 |
| phosphoheptose isomerase | VP_RS02130 | A1JR74 | - | 448141 - 448731 | 21067.2 |
| yran family protein | VP_RS02135 | Q87SH5 | - | 448735 - 449100 | 14241.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

