Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated protein csy2 | VP_RS21795 | Not Available | + | 1457867 - 1459789 | 72928.0 |
| type i-f crispr-associated protein csy3 | VP_RS21800 | Not Available | + | 1459776 - 1460819 | 39410.5 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | VP_RS21805 | Not Available | + | 1460823 - 1461419 | 22886.2 |
| helix-turn-helix domain-containing protein | VP_RS21810 | Not Available | - | 1461902 - 1462108 | 7771.47 |
| hypothetical protein | VP_RS21815 | Not Available | + | 1462357 - 1462752 | 14563.7 |
| dead/deah box helicase | VP_RS21820 | Not Available | + | 1462752 - 1464125 | 51498.1 |
| tnib family ntp-binding protein | VP_RS21825 | Not Available | - | 1464181 - 1465134 | 35823.4 |
| mu transposase c-terminal domain-containing protein | VP_RS21830 | Not Available | - | 1465131 - 1467005 | 72133.7 |
| tnsa endonuclease n-terminal domain-containing protein | VP_RS21835 | Not Available | - | 1467002 - 1467625 | 24273.9 |
| acyl-coa thioesterase | VP_RS21840 | Not Available | + | 1467767 - 1468252 | 17682.5 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

