Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VP_RS21705 | Not Available | - | 1436267 - 1436755 | 19036.1 |
| hypothetical protein | VP_RS21710 | Not Available | - | 1436783 - 1437241 | 17847.6 |
| type iii secretion protein | VP_RS21715 | Not Available | - | 1437243 - 1437776 | 20096.5 |
| hypothetical protein | VP_RS21720 | Not Available | - | 1437778 - 1438035 | 9257.98 |
| hypothetical protein | VP_RS21725 | Not Available | - | 1438182 - 1438772 | 22271.8 |
| type iii secretion system effector vopl | VP_RS21730 | Not Available | + | 1439118 - 1440572 | 52817.4 |
| hypothetical protein | VP_RS21735 | Not Available | + | 1441503 - 1444091 | 96815.5 |
| duf302 domain-containing protein | VP_RS21740 | Not Available | + | 1444198 - 1444902 | 25268.3 |
| ssle/acfd family lipoprotein zinc metalloprotease | VP_RS21745 | A5F372 | - | 1444991 - 1449484 | 165880.0 |
| is5/is1182 family transposase | VP_RS23955 | P03009 | + | 1449710 - 1450045 | 12918.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

