Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fhipep family type iii secretion protein | VP_RS21655 | A1JU76 | - | 1423630 - 1425513 | 69906.6 |
| hypothetical protein | VP_RS21660 | Not Available | - | 1425510 - 1426106 | 23158.8 |
| hypothetical protein | VP_RS21665 | Not Available | - | 1426234 - 1431102 | 165829.0 |
| dimethyladenosine transferase | VP_RS21670 | Not Available | - | 1431400 - 1431972 | 21549.1 |
| hypothetical protein | VP_RS21675 | Not Available | - | 1431983 - 1432360 | 14649.7 |
| hypothetical protein | VP_RS21680 | Not Available | - | 1432302 - 1432919 | 24183.6 |
| type iii secretion system translocator protein vopd2 | VP_RS21685 | Not Available | - | 1432966 - 1433691 | 26097.4 |
| type iii secretion system translocator protein vopb2 | VP_RS21690 | Not Available | - | 1433702 - 1434751 | 37028.1 |
| molecular chaperone | VP_RS21695 | Not Available | - | 1435092 - 1435382 | 10901.9 |
| hypothetical protein | VP_RS21700 | Not Available | - | 1435394 - 1436125 | 27400.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

