Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VP_RS21450 | Not Available | + | 1390102 - 1390287 | 6770.36 |
| hypothetical protein | VP_RS21455 | Not Available | + | 1390526 - 1390678 | 5835.3 |
| hypothetical protein | VP_RS23860 | Not Available | - | 1390967 - 1391491 | 19863.7 |
| thermostable direct hemolysin tdh | VP_RS21465 | P19250 | + | 1391960 - 1392529 | 21563.3 |
| duf302 domain-containing protein | VP_RS21470 | Not Available | + | 1393081 - 1393920 | 32268.2 |
| duf302 domain-containing protein | VP_RS21475 | Not Available | + | 1394104 - 1394486 | 13894.0 |
| hypothetical protein | VP_RS21480 | Not Available | + | 1394633 - 1395094 | 17801.9 |
| hypothetical protein | VP_RS21485 | Not Available | - | 1395325 - 1395555 | 8779.65 |
| is30 family transposase | VP_RS21490 | P37247 | + | 1395637 - 1396605 | 38478.2 |
| t3ss2 effector gtpase-activating deamidase vopc | VP_RS21495 | Not Available | - | 1396819 - 1397925 | 40233.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

