Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat-containing protein | VP_RS23915 | Not Available | - | 1377600 - 1379219 | 53773.5 |
| hypothetical protein | VP_RS21405 | Not Available | - | 1380488 - 1381966 | 55808.5 |
| hypothetical protein | VP_RS21410 | Not Available | - | 1381959 - 1382549 | 22196.1 |
| beta-ketoacyl-acp reductase | VP_RS21415 | Q9X248 | - | 1382733 - 1383452 | 25241.5 |
| metal abc transporter permease | VP_RS21420 | Not Available | - | 1383719 - 1384522 | 29033.9 |
| metal abc transporter solute-binding protein, zn/mn family | VP_RS21425 | Not Available | - | 1384525 - 1385454 | 34550.4 |
| hypothetical protein | VP_RS21430 | O67918 | - | 1385444 - 1386586 | 42340.6 |
| duf302 domain-containing protein | VP_RS21435 | Not Available | + | 1386793 - 1387448 | 23801.3 |
| hypothetical protein | VP_RS21440 | Not Available | - | 1388102 - 1388311 | 7900.43 |
| is5 family transposase | VP_RS21445 | Not Available | - | 1388675 - 1389541 | 32814.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

