Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | VP_RS21210 | Not Available | - | 1335591 - 1337003 | 53359.6 |
| vpa1262 family protein | VP_RS21215 | Not Available | + | 1337749 - 1341063 | 125581.0 |
| s-type pyocin domain-containing protein | VP_RS21220 | Q06583 | + | 1341875 - 1344451 | 95681.6 |
| bacteriocin immunity protein | VP_RS21225 | Q03708 | + | 1344453 - 1344737 | 10825.4 |
| hypothetical protein | VP_RS21230 | Not Available | + | 1344829 - 1345095 | 9945.49 |
| aaa family atpase | VP_RS21235 | O34481 | - | 1345376 - 1347403 | 75125.2 |
| vpa1267 family protein | VP_RS21240 | Not Available | - | 1347400 - 1347837 | 16154.4 |
| gamma-mobile-trio protein gmtx | VP_RS21245 | Not Available | - | 1347837 - 1348514 | 25414.2 |
| integrase family protein | VP_RS21250 | Not Available | - | 1348514 - 1351186 | 102541.0 |
| gamma-mobile-trio recombinase gmty | VP_RS21255 | Not Available | - | 1351186 - 1352643 | 55297.4 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

