Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspb | VP_RS01990 | Not Available | + | 416333 - 417016 | 24974.1 |
| tigr04211 family sh3 domain-containing protein | VP_RS01995 | P0ADU0 | - | 417110 - 417721 | 22706.3 |
| inorganic phosphate transporter | VP_RS02000 | P45268 | - | 417899 - 419158 | 43716.2 |
| tigr00153 family protein | VP_RS02005 | P44271 | - | 419289 - 419969 | 25718.5 |
| inorganic triphosphatase | VP_RS02010 | P30871 | + | 420182 - 421717 | 59242.2 |
| potassium channel family protein | VP_RS02015 | Not Available | - | 421780 - 422598 | 31131.0 |
| methyl-accepting chemotaxis protein | VP_RS02020 | A5W2C8 | + | 422647 - 423903 | 45566.2 |
| bifunctional | VP_RS02025 | Q87SK0 | + | 424012 - 426855 | 109201.0 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | VP_RS02030 | Q87SJ9 | + | 426933 - 428363 | 50942.2 |
| efflux rnd transporter outer membrane protein vpoc | VP_RS02035 | Q9K2Y1 | - | 428576 - 429904 | 47985.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

