Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | VP_RS01840 | Not Available | - | 382876 - 383667 | 29569.9 |
| type iv toxin-antitoxin system abiei family antitoxin | VP_RS01845 | Not Available | - | 383963 - 384502 | 20791.0 |
| hypothetical protein | VP_RS01850 | Not Available | + | 385290 - 385577 | 11385.7 |
| hypothetical protein | VP_RS01855 | Not Available | - | 386475 - 387470 | 38102.2 |
| restriction endonuclease subunit s | VP_RS01860 | P19704 | - | 387473 - 389245 | 66357.1 |
| n-6 dna methylase | VP_RS01865 | Q47282 | - | 389245 - 390735 | 56432.8 |
| hypothetical protein | VP_RS01870 | Not Available | + | 390899 - 391297 | 14794.6 |
| hypothetical protein | VP_RS01875 | Not Available | - | 391459 - 391608 | 5293.2 |
| translation elongation factor ts | VP_RS01880 | Not Available | + | 391685 - 392050 | 13974.4 |
| site-specific dna-methyltransferase | VP_RS01885 | P29538 | + | 392724 - 393386 | 25486.5 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

