Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipid acyltransferase family protein | VP_RS01790 | Not Available | - | 372883 - 374631 | 65316.7 |
| hypothetical protein | VP_RS01795 | Not Available | - | 374769 - 375035 | 9622.33 |
| simpl domain-containing protein | VP_RS01800 | Not Available | + | 375199 - 375918 | 26966.2 |
| duf4382 domain-containing protein | VP_RS01805 | Not Available | - | 375962 - 377011 | 37422.3 |
| eal domain-containing protein | VP_RS01810 | Not Available | + | 377275 - 378027 | 29144.8 |
| helix-turn-helix transcriptional regulator | VP_RS01815 | Not Available | + | 378312 - 379037 | 27773.7 |
| hypothetical protein | VP_RS01820 | Not Available | + | 379281 - 379553 | 10400.9 |
| metq/nlpa family abc transporter substrate-binding protein | VP_RS01825 | Q9KTJ7 | - | 379675 - 380478 | 29010.6 |
| site-specific integrase | VP_RS01830 | P37317 | + | 381054 - 382421 | 52924.5 |
| is630 family transposase | VP_RS01835 | Not Available | - | 382430 - 382594 | 6274.62 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

