Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator calr | VP_RS01690 | Not Available | + | 344763 - 345722 | 36194.4 |
| long-chain fatty acid--coa ligase | VP_RS01695 | P44446 | + | 346021 - 347829 | 67924.1 |
| acetolactate synthase 3 large subunit | VP_RS01700 | P00893 | + | 348280 - 350004 | 63050.2 |
| acetolactate synthase small subunit | VP_RS01705 | P00894 | + | 350006 - 350500 | 18253.0 |
| ggdef domain-containing protein | VP_RS01710 | Not Available | + | 350612 - 352492 | 71442.3 |
| gntr family transcriptional regulator | VP_RS01715 | Not Available | - | 352585 - 353253 | 25714.0 |
| pyruvate kinase pykf | VP_RS01720 | P0AD62 | - | 353411 - 354823 | 49975.3 |
| deor/glpr family dna-binding transcription regulator | VP_RS01725 | P15082 | + | 355255 - 356016 | 27950.5 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | VP_RS01730 | Q87SR3 | + | 356131 - 357963 | 66844.9 |
| duf3316 domain-containing protein | VP_RS01735 | Not Available | + | 358168 - 358545 | 13976.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

