Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps assembly protein lptd | VP_RS01640 | Q87ST3 | - | 331724 - 334069 | 89245.6 |
| co-chaperone djla | VP_RS01645 | Q87ST2 | + | 334337 - 335191 | 31733.2 |
| duf547 domain-containing protein | VP_RS01650 | Not Available | - | 335302 - 336084 | 29864.4 |
| 3-isopropylmalate dehydratase small subunit | VP_RS01655 | Q87ST0 | - | 336217 - 336819 | 22616.7 |
| 3-isopropylmalate dehydratase large subunit | VP_RS01660 | Q87SS9 | - | 336831 - 338246 | 50620.4 |
| 3-isopropylmalate dehydrogenase | VP_RS01665 | Q87SS8 | - | 338337 - 339428 | 39335.8 |
| 2-isopropylmalate synthase | VP_RS01670 | Q87SS7 | - | 339511 - 341058 | 56143.8 |
| sh3 domain-containing protein | VP_RS01675 | Not Available | + | 341602 - 342399 | 29621.0 |
| phosphatase pap2 family protein | VP_RS01680 | Not Available | + | 342567 - 343115 | 19890.3 |
| mj1255/vc2487 family glycosyltransferase | VP_RS01685 | Not Available | + | 343119 - 344165 | 39712.0 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

