Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | VP_RS01590 | A7N0G1 | + | 323637 - 323894 | 9208.1 |
| obg family gtpase cgta | VP_RS01595 | Q87SU2 | + | 324105 - 325277 | 43378.3 |
| threonine/serine exporter family protein | VP_RS01600 | A0A0H3FRB6 | + | 325470 - 326270 | 28474.6 |
| threonine/serine exporter family protein | VP_RS01605 | B5F504 | + | 326270 - 326743 | 17180.8 |
| type 3 dihydrofolate reductase | VP_RS01610 | P31074 | + | 326753 - 327235 | 17819.4 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | VP_RS01615 | Q87ST8 | - | 327316 - 328122 | 30866.1 |
| co2+/mg2+ efflux protein apag | VP_RS01620 | Q87ST7 | - | 328139 - 328519 | 14378.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VP_RS01625 | Q87ST6 | - | 328585 - 329394 | 30578.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | VP_RS01630 | Q87ST5 | - | 329391 - 330389 | 36068.7 |
| peptidylprolyl isomerase sura | VP_RS01635 | Q87ST4 | - | 330379 - 331662 | 47437.5 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

