Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | VP_RS01490 | Q87SW6 | - | 300349 - 300987 | 23617.8 |
| autotransporter assembly complex family protein | VP_RS01495 | E1WAU4 | + | 301155 - 302867 | 63831.3 |
| translocation/assembly module tamb domain-containing protein | VP_RS01500 | E1WAU5 | + | 302864 - 306631 | 135942.0 |
| gamma-glutamylcyclotransferase | VP_RS01505 | Q9KP33 | + | 306676 - 307023 | 13255.4 |
| duf2799 domain-containing protein | VP_RS01510 | Not Available | + | 307120 - 307482 | 13163.7 |
| inorganic diphosphatase | VP_RS01515 | Q87SW1 | - | 307557 - 308087 | 19645.4 |
| class 1 fructose-bisphosphatase | VP_RS01520 | Q87SW0 | - | 308215 - 309231 | 37301.2 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | VP_RS01525 | P37773 | + | 309544 - 310902 | 49875.6 |
| flavin prenyltransferase ubix | VP_RS01530 | Q9KP38 | + | 310908 - 311546 | 22937.9 |
| thiamine abc transporter substrate binding subunit | VP_RS01535 | P31550 | + | 311793 - 312785 | 36543.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

