Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| slc13 family permease | VP_RS01440 | Q39593 | + | 291858 - 293582 | 61779.4 |
| adenylyl-sulfate kinase | VP_RS01445 | Q87SX6 | + | 293607 - 294224 | 22895.3 |
| tigr03899 family protein | VP_RS01450 | Not Available | - | 294315 - 295220 | 33702.3 |
| duf3299 domain-containing protein | VP_RS01455 | Not Available | - | 295538 - 296032 | 17895.6 |
| abc transporter permease | VP_RS01460 | Not Available | - | 296035 - 297294 | 45870.5 |
| abc transporter atp-binding protein | VP_RS01465 | Q5LI72 | - | 297291 - 298019 | 26489.8 |
| duf2796 domain-containing protein | VP_RS01470 | Not Available | - | 298084 - 298713 | 23305.2 |
| duf2607 domain-containing protein | VP_RS01475 | P24509 | - | 298842 - 299141 | 11465.5 |
| ytfj family protein | VP_RS01480 | P39187 | - | 299301 - 299852 | 19705.7 |
| duf1107 domain-containing protein | VP_RS01485 | P0ADE3 | + | 300065 - 300265 | 7469.25 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

