Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s5 | VP_RS01340 | A7MWH5 | + | 275483 - 275986 | 17568.4 |
| 50s ribosomal protein l30 | VP_RS01345 | A7MWH6 | + | 275994 - 276170 | 6584.26 |
| 50s ribosomal protein l15 | VP_RS01350 | Q87SZ4 | + | 276176 - 276610 | 14954.4 |
| preprotein translocase subunit secy | VP_RS01355 | P78283 | + | 276631 - 277965 | 48482.4 |
| 50s ribosomal protein l36 | VP_RS01360 | A7MWH9 | + | 278004 - 278117 | 4278.5 |
| 30s ribosomal protein s13 | VP_RS01365 | Q87SZ2 | + | 278267 - 278623 | 13291.4 |
| 30s ribosomal protein s11 | VP_RS01370 | A7N0H6 | + | 278642 - 279031 | 13890.8 |
| 30s ribosomal protein s4 | VP_RS01375 | A7N0H7 | + | 279059 - 279679 | 23334.4 |
| dna-directed rna polymerase subunit alpha | VP_RS01380 | Q87SZ0 | + | 279704 - 280696 | 36474.6 |
| 50s ribosomal protein l17 | VP_RS01385 | Q87SY9 | + | 280723 - 281103 | 14203.2 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

