Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Vpf497 | VP_RS07535 | Not Available | + | 1665576 - 1667054 | 55247.3 |
| Putative transcription regulator | VP_RS07540 | Not Available | - | 1667115 - 1667480 | 14112.4 |
| phage protein | VP_RS07545 | Not Available | + | 1667809 - 1668237 | 16967.6 |
| fmn-binding protein mioc | VP_RS00005 | Q9KVY6 | - | 371 - 805 | 15580.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | VP_RS00010 | Q87TR6 | - | 910 - 2271 | 49168.6 |
| membrane protein insertase yidc | VP_RS00015 | Q87TR5 | - | 2389 - 4011 | 60392.1 |
| membrane protein insertion efficiency factor yidd | VP_RS00020 | Q9KVY3 | - | 4014 - 4271 | 9623.76 |
| ribonuclease p protein component | VP_RS00025 | Q87TR4 | - | 4238 - 4561 | 12473.1 |
| 50s ribosomal protein l34 | VP_RS00030 | A7N1E5 | - | 4608 - 4742 | 5180.57 |
| amino acid abc transporter atp-binding protein | VP_RS00035 | P54954 | - | 4984 - 5721 | 27294.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

