Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VP_RS00840 | P33915 | + | 184503 - 185546 | 38815.9 |
| extracellular solute-binding protein | VP_RS00845 | Not Available | + | 185585 - 187411 | 69664.6 |
| abc transporter atp-binding protein | VP_RS00850 | Q53193 | + | 187421 - 188278 | 31672.7 |
| is630 family transposase | VP_RS00855 | Not Available | + | 188315 - 189153 | 31425.1 |
| phosphate-starvation-inducible protein psie | VP_RS00860 | Not Available | + | 189283 - 189708 | 16235.6 |
| yicc/yloc family endoribonuclease | VP_RS00865 | P23839 | - | 189763 - 190629 | 33218.9 |
| ribonuclease ph | VP_RS00870 | Q87T93 | + | 190844 - 191560 | 25654.7 |
| orotate phosphoribosyltransferase | VP_RS00875 | Q87T92 | + | 191665 - 192306 | 23190.7 |
| kdo(2)-lipid iv(a) acyltransferase | VP_RS00880 | Not Available | - | 192367 - 193317 | 36353.1 |
| nucleoid occlusion factor slma | VP_RS00885 | Q87T90 | - | 193323 - 193913 | 22781.7 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

