Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | VP_RS00790 | Q87TB0 | - | 173636 - 173908 | 10022.9 |
| guanylate kinase | VP_RS00795 | Q87TA9 | - | 174090 - 174713 | 23446.9 |
| lipopolysaccharide assembly protein lapb | VP_RS00800 | Not Available | - | 175019 - 176233 | 45528.5 |
| energy transducer tonb | VP_RS00805 | Not Available | - | 176246 - 176878 | 23105.4 |
| biopolymer transporter exbd | VP_RS00810 | Q9ZHV9 | - | 176883 - 177290 | 14591.6 |
| mota/tolq/exbb proton channel family protein | VP_RS00815 | Not Available | - | 177316 - 177843 | 19324.2 |
| mota/tolq/exbb proton channel family protein | VP_RS00820 | Not Available | - | 177853 - 179214 | 49357.8 |
| duf3450 domain-containing protein | VP_RS00825 | Not Available | - | 179218 - 179982 | 28425.8 |
| tonb-dependent siderophore receptor | VP_RS00830 | Q8DD41 | - | 180055 - 182655 | 93979.8 |
| abc transporter permease subunit | VP_RS00835 | P0AFU1 | + | 183476 - 184501 | 37861.6 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

