Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspk | VP_RS00690 | P45781 | + | 150573 - 151583 | 37856.6 |
| type ii secretion system protein gspl | VP_RS00695 | P45782 | + | 151552 - 152754 | 44857.3 |
| type ii secretion system protein m | VP_RS00700 | P41851 | + | 152762 - 153253 | 18731.6 |
| type ii secretion system protein n | VP_RS00705 | P45784 | + | 153255 - 154016 | 27606.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | VP_RS00710 | P44332 | - | 154302 - 155129 | 30593.2 |
| adp compounds hydrolase nude | VP_RS00715 | P45799 | - | 155171 - 155740 | 21281.5 |
| fe-s biogenesis protein nfua | VP_RS00720 | Q87TC4 | - | 155961 - 156545 | 20950.6 |
| amidophosphoribosyltransferase | VP_RS00725 | Q8Z222 | - | 156643 - 157368 | 27772.4 |
| pimeloyl-acp methyl ester esterase bioh | VP_RS00730 | Q87TC2 | + | 157453 - 158220 | 28064.8 |
| hypothetical protein | VP_RS00735 | Not Available | + | 158344 - 158808 | 17623.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

