Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp33 family molecular chaperone hslo | VP_RS00640 | Q87TE0 | - | 141147 - 142022 | 32286.1 |
| ribosome-associated heat shock protein hsp15 | VP_RS00645 | P0ACH0 | - | 142054 - 142440 | 14988.9 |
| type ii secretion system protein gspc | VP_RS00650 | P45777 | + | 142696 - 143619 | 33534.2 |
| type ii secretion system secretin gspd | VP_RS00655 | P45779 | + | 143656 - 145683 | 73321.1 |
| type ii secretion system atpase gspe | VP_RS00660 | P37093 | + | 145683 - 147185 | 55694.2 |
| type ii secretion system inner membrane protein gspf | VP_RS00665 | P45780 | + | 147185 - 148402 | 44596.3 |
| type ii secretion system major pseudopilin gspg | VP_RS00670 | P45773 | + | 148464 - 148907 | 16162.1 |
| type ii secretion system minor pseudopilin gsph | VP_RS00675 | P45774 | + | 148938 - 149534 | 22163.5 |
| type ii secretion system minor pseudopilin gspi | VP_RS00680 | P45775 | + | 149521 - 149910 | 14243.4 |
| type ii secretion system minor pseudopilin gspj | VP_RS00685 | P45776 | + | 149897 - 150580 | 26240.1 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

