Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4124 domain-containing protein | VP_RS00590 | Not Available | - | 128699 - 129280 | 20818.9 |
| glutamate--ammonia ligase | VP_RS00595 | Q9KNJ2 | - | 129479 - 130888 | 51486.9 |
| translational gtpase typa | VP_RS00600 | P0A3B2 | + | 131418 - 133247 | 66957.1 |
| aaa family atpase | VP_RS00605 | Not Available | + | 133320 - 133862 | 19687.6 |
| duf2959 domain-containing protein | VP_RS00610 | Not Available | - | 133894 - 134535 | 24193.5 |
| virulence factor brkb family protein | VP_RS00615 | Q87TE5 | + | 134570 - 135514 | 34585.4 |
| d-aminoacyl-trna deacylase | VP_RS00620 | Q87TE4 | + | 135486 - 135920 | 16036.2 |
| bifunctional gnat family n-acetyltransferase/hotdog fold thioesterase | VP_RS00625 | P0ADQ4 | + | 136029 - 136946 | 34793.9 |
| asma family protein | VP_RS00630 | Not Available | - | 136932 - 138986 | 76633.1 |
| phosphoenolpyruvate carboxykinase (atp) | VP_RS00635 | Q87TE1 | - | 139182 - 140810 | 60014.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

