Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtp-binding protein yiha/ysxc | VP_RS00540 | Q87TG0 | - | 116700 - 117359 | 24642.8 |
| cytochrome c | VP_RS00545 | Q52369 | + | 117519 - 118136 | 21869.3 |
| class i sam-dependent methyltransferase | VP_RS00550 | Not Available | + | 118935 - 119573 | 25035.6 |
| der gtpase-activating protein yihi | VP_RS00555 | Q87TF6 | + | 119573 - 120115 | 20521.2 |
| duf2489 domain-containing protein | VP_RS00560 | P44043 | + | 120123 - 120611 | 18524.7 |
| oxygen-independent coproporphyrinogen iii oxidase | VP_RS00565 | P0A1E2 | + | 120797 - 122188 | 53677.2 |
| adenosine deaminase | VP_RS00570 | Q87TF3 | - | 122259 - 123263 | 36438.5 |
| eal domain-containing protein | VP_RS00575 | Not Available | - | 123411 - 125957 | 95513.4 |
| nitrogen regulation protein nr(i) | VP_RS00580 | P0AFB9 | - | 126059 - 127462 | 52322.5 |
| nitrogen regulation protein nr(ii) | VP_RS00585 | P19906 | - | 127521 - 128567 | 38732.9 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

