Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS10170 | Not Available | - | 2238450 - 2238920 | 16864.1 |
| Putative tail protein | PFL_RS10175 | Not Available | + | 2239001 - 2240044 | 38007.3 |
| Glycoside hydrolase family 19 protein | PFL_RS10180 | Not Available | + | 2240071 - 2240622 | 19846.9 |
| Rz-like phage lysis protein | PFL_RS10185 | Not Available | + | 2240619 - 2241140 | 18187.5 |
| hypothetical protein | PFL_RS31900 | Not Available | + | 2241373 - 2242950 | 58253.4 |
| Hypothetical protein | PFL_RS10190 | Not Available | - | 2243016 - 2243699 | 25216.0 |
| Protein umud | PFL_RS10195 | Not Available | + | 2243797 - 2244222 | 15254.5 |
| Error-prone lesion bypass dna polymerase v | PFL_RS10200 | Not Available | + | 2244215 - 2245495 | 47743.0 |
| duf4435 domain-containing protein | PFL_RS31905 | Not Available | - | 2245686 - 2246588 | 33654.9 |
| Gp202 | PFL_RS31910 | Not Available | - | 2246585 - 2247985 | 52614.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


