Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | PFL_RS03455 | Not Available | - | 793198 - 794544 | 48424.2 |
| hypothetical protein | PFL_RS03460 | Not Available | - | 794612 - 794905 | 10726.6 |
| mazg-like family protein | PFL_RS03465 | Not Available | + | 795096 - 795401 | 11641.0 |
| methyltransferase domain-containing protein | PFL_RS03470 | Not Available | + | 795398 - 796147 | 28211.1 |
| duf4136 domain-containing protein | PFL_RS03475 | Not Available | + | 796159 - 796767 | 21913.5 |
| duf4136 domain-containing protein | PFL_RS03480 | Not Available | + | 796806 - 797363 | 20850.5 |
| pilus assembly protein tadg-related protein | PFL_RS03485 | Not Available | + | 797523 - 799517 | 67485.2 |
| pas domain-containing sensor histidine kinase | PFL_RS03490 | Not Available | - | 799502 - 802270 | 103435.0 |
| tade/tadg family type iv pilus assembly protein | PFL_RS03495 | Not Available | - | 802267 - 802704 | 15667.1 |
| prepilin peptidase | PFL_RS03500 | Not Available | + | 802779 - 803246 | 16516.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


