Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | PFL_RS03405 | Not Available | - | 781164 - 782042 | 31605.5 |
| acetyl-coa carboxylase biotin carboxylase subunit | PFL_RS03410 | Not Available | - | 782272 - 783633 | 49118.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | PFL_RS03415 | Not Available | - | 783651 - 784109 | 16074.3 |
| type ii 3-dehydroquinate dehydratase | PFL_RS03420 | Not Available | - | 784158 - 784610 | 16502.7 |
| methyl-accepting chemotaxis protein | PFL_RS03425 | Not Available | - | 784841 - 786802 | 69178.5 |
| diguanylate cyclase gcba | PFL_RS03430 | Not Available | - | 786856 - 788523 | 62823.3 |
| duf2333 family protein | PFL_RS03435 | Not Available | + | 788812 - 789879 | 39341.6 |
| nudix hydrolase | PFL_RS03440 | Not Available | + | 789883 - 790419 | 19970.7 |
| translation initiation factor sui1 | PFL_RS03445 | Not Available | + | 790604 - 790975 | 12614.4 |
| arginine decarboxylase | PFL_RS03450 | Not Available | + | 791198 - 793111 | 71040.5 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


