Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein | PFL_RS10120 | Not Available | + | 2229065 - 2229946 | 31194.0 |
| Tail protein i | PFL_RS10125 | Not Available | + | 2229948 - 2230553 | 22269.7 |
| Tail fiber protein | PFL_RS10130 | Not Available | + | 2230550 - 2231776 | 42751.6 |
| hypothetical protein | PFL_RS32625 | Not Available | + | 2231776 - 2232558 | 25746.2 |
| Tail sheath protein | PFL_RS10140 | Not Available | + | 2232704 - 2233870 | 42053.7 |
| Tail protein | PFL_RS10145 | Not Available | + | 2233883 - 2234392 | 18404.6 |
| Hypothetical protein | PFL_RS10150 | Not Available | + | 2234404 - 2234709 | 10982.2 |
| Bacteriophage tail length determination protein | PFL_RS10155 | Not Available | + | 2234851 - 2237418 | 88153.7 |
| Putative tail protein | PFL_RS10160 | Not Available | + | 2237427 - 2238272 | 29764.6 |
| Putative tail protein x | PFL_RS10165 | Not Available | + | 2238247 - 2238453 | 7322.67 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


