Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PFL_RS03055 | Not Available | + | 703982 - 704749 | 27605.0 |
| cation diffusion facilitator family transporter | PFL_RS03060 | Not Available | + | 704997 - 705902 | 33802.8 |
| age family epimerase/isomerase | PFL_RS03065 | Not Available | - | 705976 - 707115 | 42246.5 |
| hupe/urej family protein | PFL_RS03070 | Not Available | - | 707333 - 707905 | 18976.6 |
| urease accessory protein ureg | PFL_RS03075 | Not Available | - | 707944 - 708558 | 21750.3 |
| urease accessory protein uref | PFL_RS03080 | Not Available | - | 708568 - 709242 | 25197.9 |
| urease accessory protein uree | PFL_RS03085 | Not Available | - | 709239 - 709739 | 18653.1 |
| tetr family transcriptional regulator | PFL_RS03090 | Not Available | - | 710020 - 710652 | 23338.4 |
| hypothetical protein | PFL_RS03095 | Not Available | - | 710821 - 711288 | 16555.8 |
| asma family protein | PFL_RS03100 | Not Available | + | 711674 - 713749 | 74492.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


