Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ammonia-dependent nad(+) synthetase | PFL_RS03005 | Not Available | - | 691444 - 692271 | 30167.0 |
| nicotinate phosphoribosyltransferase | PFL_RS03010 | Not Available | - | 692275 - 693489 | 46600.3 |
| lysr family transcriptional regulator | PFL_RS03015 | Not Available | - | 693692 - 694594 | 34624.4 |
| aldehyde dehydrogenase family protein | PFL_RS03020 | Not Available | + | 694765 - 696255 | 53710.1 |
| fad-binding oxidoreductase | PFL_RS03025 | Not Available | + | 696369 - 697652 | 46529.7 |
| branched-chain amino acid abc transporter substrate-binding protein | PFL_RS03030 | Not Available | + | 698017 - 699153 | 39995.6 |
| abc transporter permease subunit | PFL_RS03035 | Not Available | + | 699315 - 700229 | 32532.0 |
| high-affinity branched-chain amino acid abc transporter permease livm | PFL_RS03040 | Not Available | + | 700232 - 701527 | 46488.6 |
| atp-binding cassette domain-containing protein | PFL_RS03045 | Not Available | + | 701524 - 702396 | 32141.1 |
| abc transporter atp-binding protein | PFL_RS03050 | Not Available | + | 702393 - 703109 | 26315.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


