Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | PFL_RS02960 | Not Available | + | 677204 - 678601 | 51620.4 |
| ygiq family radical sam protein | PFL_RS02965 | Not Available | + | 678782 - 681079 | 85933.1 |
| hypothetical protein | PFL_RS02970 | Not Available | + | 681261 - 682193 | 33340.4 |
| hypothetical protein | PFL_RS02975 | Not Available | + | 682190 - 682639 | 17233.0 |
| duf2126 domain-containing protein | PFL_RS02980 | Not Available | + | 682811 - 686086 | 122586.0 |
| circularly permuted type 2 atp-grasp protein | PFL_RS02985 | Not Available | + | 686174 - 688660 | 92896.4 |
| transglutaminase family protein | PFL_RS02990 | Not Available | + | 688660 - 689550 | 33034.4 |
| hypothetical protein | PFL_RS33025 | Not Available | - | 689660 - 689836 | 6444.4 |
| tigr00730 family rossman fold protein | PFL_RS02995 | Not Available | - | 689905 - 690492 | 20794.2 |
| azurin | PFL_RS03000 | Not Available | + | 690844 - 691290 | 15835.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


