Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase | PFL_RS02805 | Not Available | - | 645476 - 646291 | 29399.0 |
| hdod domain-containing protein | PFL_RS02810 | Not Available | - | 646335 - 647873 | 57901.0 |
| flagellar motor stator protein mota | PFL_RS02815 | Not Available | + | 648040 - 648891 | 30242.1 |
| flagellar motor protein motb | PFL_RS02820 | Not Available | + | 648895 - 650013 | 39959.4 |
| small ribosomal subunit biogenesis gtpase rsga | PFL_RS02825 | Not Available | - | 650066 - 651097 | 37383.8 |
| oligoribonuclease | PFL_RS02830 | Not Available | + | 651206 - 651748 | 20627.6 |
| trimeric intracellular cation channel family protein | PFL_RS02835 | Not Available | + | 651866 - 652480 | 22508.5 |
| trna epoxyqueuosine(34) reductase queg | PFL_RS02840 | Not Available | - | 652462 - 653541 | 40298.1 |
| nad(p)h-hydrate dehydratase | PFL_RS02845 | Not Available | + | 653605 - 654465 | 28787.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | PFL_RS02850 | Not Available | + | 654453 - 654923 | 17021.5 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


