Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | PFL_RS02655 | Not Available | + | 610533 - 611684 | 43162.2 |
| glycosyltransferase | PFL_RS02660 | Not Available | + | 611684 - 612568 | 34051.0 |
| catb-related o-acetyltransferase | PFL_RS02665 | Not Available | + | 612583 - 613203 | 22873.2 |
| o-antigen ligase family protein | PFL_RS02670 | Not Available | - | 613283 - 615145 | 69427.9 |
| lipid a export permease/atp-binding protein msba | PFL_RS02675 | Not Available | + | 615302 - 617107 | 66172.9 |
| sulfotransferase family 2 domain-containing protein | PFL_RS02680 | Not Available | + | 617295 - 617999 | 27594.1 |
| adenylyl-sulfate kinase | PFL_RS02685 | Not Available | + | 617992 - 618603 | 22232.1 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | PFL_RS02690 | Not Available | + | 618706 - 620139 | 50439.8 |
| hypothetical protein | PFL_RS02695 | Not Available | - | 620191 - 621162 | 37001.8 |
| aldo/keto reductase | PFL_RS02700 | Not Available | - | 621204 - 622016 | 29380.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


