Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | PFL_RS02605 | Not Available | + | 599347 - 600471 | 42367.1 |
| lipopolysaccharide core heptose(i) kinase rfap | PFL_RS02610 | Not Available | + | 600468 - 601274 | 30381.0 |
| lipopolysaccharide kinase inaa family protein | PFL_RS02615 | Not Available | + | 601274 - 602008 | 29009.7 |
| lipopolysaccharide kinase inaa family protein | PFL_RS02620 | Not Available | + | 602005 - 602757 | 28549.0 |
| lipopolysaccharide kinase inaa family protein | PFL_RS02625 | Not Available | + | 602757 - 604211 | 54357.8 |
| carbamoyltransferase | PFL_RS02630 | Not Available | + | 604411 - 606168 | 65447.6 |
| glycosyltransferase | PFL_RS02635 | Not Available | + | 606152 - 607282 | 41489.3 |
| antimicrobial resistance protein mig-14 | PFL_RS02640 | Not Available | + | 607282 - 608178 | 33649.2 |
| pig-l deacetylase family protein | PFL_RS02645 | Not Available | + | 608187 - 609599 | 53241.7 |
| duf6625 family protein | PFL_RS02650 | Not Available | + | 609652 - 610530 | 34747.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


