Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | PFL_RS10070 | Not Available | + | 2222393 - 2223874 | 55291.3 |
| Head maturation protease | PFL_RS10075 | Not Available | + | 2223871 - 2225013 | 40267.8 |
| Head decoration protein d | PFL_RS10080 | Not Available | + | 2225010 - 2225354 | 11886.2 |
| Major capsid protein | PFL_RS10085 | Not Available | + | 2225418 - 2226413 | 36384.4 |
| hypothetical protein | PFL_RS10090 | Not Available | + | 2226416 - 2226730 | 11360.9 |
| Hypothetical protein | PFL_RS10095 | Not Available | + | 2226727 - 2227380 | 24692.5 |
| Putative minor tail protein | PFL_RS10100 | Not Available | + | 2227373 - 2227885 | 18838.3 |
| Putative baseplate assembly protein v | PFL_RS10105 | Not Available | + | 2227882 - 2228472 | 20231.7 |
| hypothetical protein | PFL_RS10110 | Not Available | + | 2228537 - 2228737 | 7144.35 |
| Baseplate assembly protein | PFL_RS10115 | Not Available | + | 2228742 - 2229068 | 12072.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


