Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein euth | PFL_RS02555 | Not Available | + | 582828 - 584063 | 44461.8 |
| duf1937 family protein | PFL_RS02560 | Not Available | + | 584100 - 584456 | 13146.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | PFL_RS02565 | Not Available | + | 584560 - 585396 | 31544.1 |
| peptide-methionine (s)-s-oxide reductase msra | PFL_RS02570 | Not Available | - | 585459 - 586106 | 23744.2 |
| ggdef and eal domain-containing protein | PFL_RS02575 | Not Available | - | 586181 - 588874 | 100642.0 |
| dihydrolipoyllysine-residue acetyltransferase | PFL_RS02580 | Not Available | - | 589186 - 591135 | 65688.3 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | PFL_RS02585 | Not Available | - | 591147 - 593792 | 99345.2 |
| bifunctional | PFL_RS02590 | Not Available | + | 594176 - 597115 | 109362.0 |
| lipopolysaccharide heptosyltransferase ii | PFL_RS02595 | Not Available | + | 597250 - 598284 | 38248.3 |
| lipopolysaccharide heptosyltransferase i | PFL_RS02600 | Not Available | + | 598286 - 599347 | 39383.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


