Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS02460 | Not Available | - | 552070 - 553014 | 34837.7 |
| igaa/umob family intracellular growth attenuator | PFL_RS02465 | Not Available | - | 553097 - 553537 | 15946.5 |
| protein adenylyltransferase selo | PFL_RS02470 | Not Available | - | 553712 - 555175 | 55307.6 |
| mechanosensitive channel msck | PFL_RS02475 | Not Available | - | 555225 - 558578 | 124232.0 |
| potassium/proton antiporter | PFL_RS02480 | Not Available | - | 558641 - 560383 | 61283.4 |
| methyl-accepting chemotaxis protein | PFL_RS02485 | Not Available | - | 560560 - 562185 | 58814.7 |
| methyl-accepting chemotaxis protein | PFL_RS02490 | Not Available | - | 562380 - 564005 | 58794.4 |
| hypothetical protein | PFL_RS02495 | Not Available | + | 564317 - 564547 | 8262.7 |
| cell division protein zapa | PFL_RS02500 | Not Available | + | 564544 - 564846 | 11192.7 |
| methyl-accepting chemotaxis protein | PFL_RS02505 | Not Available | + | 564965 - 566902 | 69348.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


