Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | PFL_RS31540 | Not Available | - | 7063158 - 7064030 | 32022.8 |
| para family protein | PFL_RS31545 | Not Available | - | 7064040 - 7064837 | 29064.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | PFL_RS31550 | Not Available | - | 7064856 - 7065491 | 23507.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | PFL_RS31555 | Not Available | - | 7065497 - 7067389 | 69018.5 |
| phytanoyl-coa dioxygenase family protein | PFL_RS31560 | Not Available | - | 7067935 - 7068756 | 31194.8 |
| amino acid permease | PFL_RS31565 | Not Available | - | 7068760 - 7070172 | 50387.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | PFL_RS31570 | Not Available | - | 7070484 - 7071854 | 48848.2 |
| membrane protein insertase yidc | PFL_RS31575 | Not Available | - | 7071934 - 7073634 | 62653.0 |
| membrane protein insertion efficiency factor yidd | PFL_RS32410 | Not Available | - | 7073637 - 7073882 | 9227.23 |
| ribonuclease p protein component | PFL_RS32415 | Not Available | - | 7073875 - 7074276 | 15054.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


