Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflk | PFL_RS31390 | Not Available | - | 7031789 - 7033738 | 69376.0 |
| cdp-alcohol phosphatidyltransferase family protein | PFL_RS31395 | Not Available | + | 7033984 - 7034607 | 22309.0 |
| bifunctional alpha/beta hydrolase/class i sam-dependent methyltransferase | PFL_RS31400 | Not Available | + | 7034618 - 7036375 | 65324.0 |
| phosphatase pap2/dual specificity phosphatase family protein | PFL_RS31405 | Not Available | + | 7036375 - 7037721 | 49703.6 |
| hypothetical protein | PFL_RS31410 | Not Available | + | 7037711 - 7038166 | 16217.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PFL_RS31415 | Not Available | + | 7038176 - 7038799 | 23248.2 |
| phosphatidate cytidylyltransferase | PFL_RS31420 | Not Available | + | 7038801 - 7039733 | 34498.2 |
| lrp/asnc family transcriptional regulator | PFL_RS31425 | Not Available | - | 7039739 - 7040212 | 17239.0 |
| lyse family translocator | PFL_RS31430 | Not Available | + | 7040357 - 7040986 | 22416.2 |
| hypothetical protein | PFL_RS31435 | Not Available | - | 7041161 - 7043311 | 78999.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


