Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding protein dksa | PFL_RS31290 | Not Available | - | 7012382 - 7012786 | 15836.8 |
| hypothetical protein | PFL_RS31295 | Not Available | + | 7012908 - 7013285 | 13252.7 |
| n-acetylmuramoyl-l-alanine amidase | PFL_RS31300 | Not Available | - | 7013395 - 7014618 | 44262.8 |
| gtp cyclohydrolase fole2 | PFL_RS31305 | Not Available | + | 7014748 - 7015641 | 32706.4 |
| metal abc transporter atp-binding protein | PFL_RS31310 | Not Available | + | 7015641 - 7016306 | 23959.4 |
| metal abc transporter permease | PFL_RS31315 | Not Available | + | 7016306 - 7017172 | 30240.6 |
| metal abc transporter substrate-binding protein | PFL_RS31320 | Not Available | + | 7017184 - 7018068 | 31706.8 |
| phosphoribosyl-amp cyclohydrolase | PFL_RS31325 | Not Available | + | 7018065 - 7018508 | 16206.3 |
| daph/dapd/glmu-related protein | PFL_RS31330 | Not Available | + | 7018498 - 7019058 | 19667.3 |
| dihydroorotase | PFL_RS31335 | Not Available | + | 7019061 - 7020395 | 49156.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


