Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | PFL_RS30695 | Not Available | + | 6877319 - 6878224 | 31846.2 |
| orotate phosphoribosyltransferase | PFL_RS30700 | Not Available | - | 6878376 - 6879020 | 23078.7 |
| exodeoxyribonuclease iii | PFL_RS30705 | Not Available | + | 6879102 - 6879881 | 29840.3 |
| duf4870 domain-containing protein | PFL_RS30710 | Not Available | - | 6879943 - 6880311 | 13565.1 |
| ribonuclease ph | PFL_RS30715 | Not Available | - | 6880342 - 6881064 | 25689.0 |
| yicc/yloc family endoribonuclease | PFL_RS30720 | Not Available | + | 6881337 - 6882200 | 32010.4 |
| guanylate kinase | PFL_RS30725 | Not Available | + | 6882211 - 6882831 | 23122.5 |
| dna-directed rna polymerase subunit omega | PFL_RS30730 | Not Available | + | 6883000 - 6883263 | 9676.37 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | PFL_RS30735 | Not Available | + | 6883321 - 6885426 | 78544.5 |
| rida family protein | PFL_RS30740 | Not Available | + | 6885451 - 6885831 | 13510.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


