Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | PFL_RS30495 | Not Available | + | 6834858 - 6835754 | 33525.2 |
| had family hydrolase | PFL_RS30500 | Not Available | + | 6835754 - 6836458 | 25994.8 |
| transcriptional regulator suta | PFL_RS30505 | Not Available | - | 6836585 - 6836908 | 11369.8 |
| secondary thiamine-phosphate synthase enzyme yjbq | PFL_RS30510 | Not Available | - | 6837011 - 6837436 | 15570.7 |
| ammonium transporter | PFL_RS30515 | Not Available | - | 6837647 - 6838984 | 45902.1 |
| p-ii family nitrogen regulator | PFL_RS30520 | Not Available | - | 6839018 - 6839356 | 12330.9 |
| accessory factor ubik family protein | PFL_RS30525 | Not Available | + | 6839773 - 6840033 | 9442.38 |
| yifb family mg chelatase-like aaa atpase | PFL_RS30530 | Not Available | + | 6840201 - 6841694 | 53105.2 |
| aldose 1-epimerase family protein | PFL_RS30535 | Not Available | - | 6841699 - 6842913 | 44635.9 |
| tetr/acrr family transcriptional regulator | PFL_RS30540 | Not Available | - | 6843026 - 6843604 | 21346.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


