Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class ii poly(r)-hydroxyalkanoic acid synthase | PFL_RS02210 | Not Available | - | 496711 - 498390 | 62505.4 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | PFL_RS02215 | Not Available | - | 498648 - 499025 | 13892.7 |
| atp-dependent protease atpase subunit hslu | PFL_RS02220 | Not Available | - | 499117 - 500457 | 50049.3 |
| atp-dependent protease subunit hslv | PFL_RS02225 | Not Available | - | 500515 - 501045 | 18722.4 |
| spor domain-containing protein | PFL_RS02230 | Not Available | - | 501244 - 501951 | 25300.8 |
| arginine--trna ligase | PFL_RS02235 | Not Available | - | 501953 - 503689 | 63926.8 |
| primosomal protein n' | PFL_RS02240 | Not Available | - | 503900 - 506119 | 82065.5 |
| 50s ribosomal protein l31 | PFL_RS02245 | Not Available | + | 506419 - 506640 | 7924.54 |
| thermonuclease family protein | PFL_RS02250 | Not Available | + | 506682 - 507461 | 28520.1 |
| malic enzyme-like nad(p)-binding protein | PFL_RS02255 | Not Available | + | 507649 - 508917 | 45009.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


