Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | PFL_RS30395 | Not Available | + | 6816869 - 6817534 | 24059.5 |
| rsd/algq family anti-sigma factor | PFL_RS30400 | Not Available | - | 6817595 - 6818053 | 17199.4 |
| disulfide bond formation protein b | PFL_RS30405 | Not Available | - | 6818261 - 6818782 | 19022.9 |
| heme biosynthesis protein hemy | PFL_RS30410 | Not Available | - | 6818936 - 6820174 | 46503.9 |
| uroporphyrinogen-iii c-methyltransferase | PFL_RS30415 | Not Available | - | 6820171 - 6821310 | 41677.3 |
| uroporphyrinogen-iii synthase | PFL_RS30420 | Not Available | - | 6821328 - 6822095 | 27602.5 |
| hydroxymethylbilane synthase | PFL_RS30425 | Not Available | - | 6822092 - 6823033 | 33424.1 |
| lyttr family dna-binding domain-containing protein | PFL_RS30430 | Not Available | - | 6823160 - 6823906 | 27547.6 |
| argininosuccinate lyase | PFL_RS30435 | Not Available | + | 6824533 - 6825927 | 51608.8 |
| glutathione s-transferase | PFL_RS30440 | Not Available | - | 6825979 - 6826626 | 23731.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


