Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr02449 family protein | PFL_RS30255 | Not Available | + | 6786754 - 6786963 | 8141.91 |
| cell division protein zapa | PFL_RS30260 | Not Available | + | 6786960 - 6787283 | 11859.0 |
| Ncrna_class:other | Not Available | Not Available | + | 6787307 - 6787485 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | PFL_RS30265 | Not Available | + | 6787576 - 6788181 | 23204.5 |
| hypothetical protein | PFL_RS33170 | Not Available | - | 6788215 - 6788364 | 5554.85 |
| eve domain-containing protein | PFL_RS30270 | Not Available | + | 6788561 - 6789010 | 16688.0 |
| hlyd family secretion protein | PFL_RS30275 | Not Available | + | 6789199 - 6790164 | 34837.0 |
| ribosome-associated atpase/putative transporter rbba | PFL_RS30280 | Not Available | + | 6790161 - 6792887 | 98688.0 |
| abc transporter permease | PFL_RS30285 | Not Available | + | 6792887 - 6794005 | 40151.8 |
| flagellar basal body-associated protein flil | PFL_RS30290 | Not Available | - | 6794097 - 6794504 | 14770.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


